diff --git a/examples/met.mdx b/examples/met.mdx index b34993a5..e296526d 100644 --- a/examples/met.mdx +++ b/examples/met.mdx @@ -1,52 +1,16 @@ +- when ingesting: + - pubpath - when update: - load: - - "http://mds.edugain.org/" - - "http://metadata.aai.switch.ch/metadata.switchaai.xml" - - "http://eduid.at/md/aconet-registered.xml" - - "https://ds.aaf.edu.au/distribution/metadata/metadata.aaf.signed.complete.xml" - - "https://ds.cafe.rnp.br/metadata/cafe-metadata.xml" - - "http://www.carsi.edu.cn/carsimetadata/carsifed-metadata.xml" - - "https://www.aai.dfn.de/fileadmin/metadata/DFN-AAI-metadata.xml" - - "https://metadata.eduid.cz/entities/eduid" - - "https://www.rediris.es/sir/shibsir1metadata.xml" - - "https://haka.funet.fi/metadata/haka-metadata.xml" - - "https://services-federation.renater.fr/metadata/renater-metadata.xml" - - "http://aai.grnet.gr/metadata.xml" - - "http://metadata.eduid.hu/current/href.xml" - - "https://edugate.heanet.ie/edugate-federation-metadata-signed.xml" - - "http://www.garr.it/idem-metadata/idem-metadata-sha256.xml" - - "https://metadata.gakunin.nii.ac.jp/gakunin-metadata.xml" - - "https://laife.lanet.lv/metadata/laife-metadata.xml" - - "http://md.swamid.se/md/swamid-2.0.xml" - - "http://md.incommon.org/InCommon/InCommon-metadata.xml" - - "http://ds.aai.arnes.si/metadata/aai.arnes.si.signed.xml" - - "https://directory.tuakiri.ac.nz/metadata/tuakiri-metadata-signed.xml" - - "https://caf-shibops.ca/CoreServices/cafshib_metadata_signed.xml" - - "https://federation.belnet.be/federation-metadata.xml" - - "http://metadata.ukfederation.org.uk/ukfederation-metadata.xml" - - "https://engine.surfconext.nl/authentication/proxy/idps-metadata" - - "http://metadata-rctsaai.fccn.pt/metadata/RCTSaai_metadata.xml" - - "https://login.aaiedu.hr/sso/module.php/aggregator/?id=aaieduhr_edugain" - - "https://metadata.feide.no/feide-edugain-metadata.xml" - - "http://parichay.inflibnet.ac.in/metadata/infed.xml" - - "http://cofre.reuna.cl/metadata/cofre-md.xml" - - "https://taeva.taat.edu.ee/module.php/janus/aggregator.php?id=prod-idp" - - "http://www.fedurus.ru/metadata.fedurus.xml" - - "https://discovery.litnet.lt/simplesaml/module.php/aggregator/?id=litnetexport&mimetype=text/plain" - - "https://gridp.garr.it/metadata/gridp.xml" - - "https://wayf.wayf.dk/saml2/idp/metadata.php" - - "https://www.marwan.ma/eduidm-federation.xml" - #- "http://colfire.co/metadata/colfire-metadata.xml" - - "https://aai.pionier.net.pl/pionier.xml" - - "https://iif.iucc.ac.il/sp/saml2/idp/metadata.php" + - examples/met.xrd via ingesting - when request: - select - pipe: - when accept application/xml: - xslt: stylesheet: tidy.xsl - - pubinfo: - publisher: http://www.swamid.se/ + #- pubinfo: + # publisher: http://met.terena.org/ - first - finalize: cacheDuration: PT5H diff --git a/examples/met.xrd b/examples/met.xrd new file mode 100644 index 00000000..628694bd --- /dev/null +++ b/examples/met.xrd @@ -0,0 +1,237 @@ + + + http://mds.edugain.org/ + + eduGAIN + + + + http://metadata.aai.switch.ch/metadata.switchaai.xml + + SWITCHaai Federation + + + + http://eduid.at/md/aconet-registered.xml + + ACOnet Identity Federation (eduID.at) + + + + https://ds.aaf.edu.au/distribution/metadata/metadata.aaf.signed.complete.xml + + Australian Access Federation + + + + https://ds.cafe.rnp.br/metadata/cafe-metadata.xml + + CAFe Federation + + + + http://www.carsi.edu.cn/carsimetadata/carsifed-metadata.xml + + CARSI Federation + + + + https://www.aai.dfn.de/fileadmin/metadata/DFN-AAI-metadata.xml + + DFN-AAI + + + + https://metadata.eduid.cz/entities/eduid + + eduID.cz + + + + https://www.rediris.es/sir/shibsir1metadata.xml + + SIR Federation + + + + https://haka.funet.fi/metadata/haka-metadata.xml + + Haka + + + + https://services-federation.renater.fr/metadata/renater-metadata.xml + + Fédération Éducation-Recherche + + + + http://aai.grnet.gr/metadata.xml + + GRNET Federation + + + + http://metadata.eduid.hu/current/href.xml + + eduID.hu Federation + + + + https://edugate.heanet.ie/edugate-federation-metadata-signed.xml + + Edugate Federation + + + + http://www.garr.it/idem-metadata/idem-metadata-sha256.xml + + IDEM federation + + + + https://metadata.gakunin.nii.ac.jp/gakunin-metadata.xml + + GakuNin Federation + + + + https://laife.lanet.lv/metadata/laife-metadata.xml + + LAIFE Federation + + + + http://md.swamid.se/md/swamid-2.0.xml + + SWAMID Federation + + + + http://md.incommon.org/InCommon/InCommon-metadata.xml + + InCommon Federation + + + + http://ds.aai.arnes.si/metadata/aai.arnes.si.signed.xml + + ArnesAAI Federation + + + + https://directory.tuakiri.ac.nz/metadata/tuakiri-metadata-signed.xml + + Tuakiri Federation + + + + https://caf-shibops.ca/CoreServices/cafshib_metadata_signed.xml + + CAF Federation + + + + https://federation.belnet.be/federation-metadata.xml + + Belnet Federation + + + + http://metadata.ukfederation.org.uk/ukfederation-metadata.xml + + UK Access Management Federation + + + + https://engine.surfconext.nl/authentication/proxy/idps-metadata + + SURFconext Federation + + + + http://metadata-rctsaai.fccn.pt/metadata/RCTSaai_metadata.xml + + RCTSaai Federation + + + + https://login.aaiedu.hr/sso/module.php/aggregator/?id=aaieduhr_edugain + + AAI@eduHr Federation + + + + https://metadata.feide.no/feide-edugain-metadata.xml + + FEIDE Federation + + + + http://parichay.inflibnet.ac.in/metadata/infed.xml + + INFLIBNET Access Management Federation + + + + http://cofre.reuna.cl/metadata/cofre-md.xml + + COFRe Federation + + + + https://taeva.taat.edu.ee/module.php/janus/aggregator.php?id=prod-idp + + TAAT Federation + + + + http://www.fedurus.ru/metadata.fedurus.xml + + φEDUrus Identity Federation + + + + https://discovery.litnet.lt/simplesaml/module.php/aggregator/?id=litnetexport&mimetype=text/plain + + LITNET FEDI Federation + + + + https://gridp.garr.it/metadata/gridp.xml + + Grid IDentity Pool Federation + + + + https://wayf.wayf.dk/saml2/idp/metadata.php + + WAYF Federation + + + + + + https://aai.pionier.net.pl/pionier.xml + + PIONIER Federation + + + + https://iif.iucc.ac.il/sp/saml2/idp/metadata.php + + IUCC Identity Federation + + + + diff --git a/setup.py b/setup.py index b3a8440c..39840c75 100755 --- a/setup.py +++ b/setup.py @@ -47,7 +47,9 @@ 'pyff': ['xslt/*.xsl', 'site/static/js/*.js', 'site/static/js/select2/*', - 'site/static/css/*', + 'site/static/css/font-awesome/fonts/*', + 'site/static/css/font-awesome/css/*', + 'site/static/css/*.css', 'site/templates/*', 'site/icons/*', 'site/static/bootstrap/fonts/*', diff --git a/src/pyff/builtins.py b/src/pyff/builtins.py index 918ad2e9..f4d2e83b 100644 --- a/src/pyff/builtins.py +++ b/src/pyff/builtins.py @@ -1034,10 +1034,11 @@ def _reginfo(req, *opts): return req.t -@pipe(name='pubinfo') -def _pubinfo(req, *opts): +@pipe(name='pubpath') +def _add_pubpath(req, *opts): """ -Sets publication info extension on EntityDescription element +Adds a publicationpath element. If (cf example below) is missing then the source URL +(if the pipe is used in a 'via' statement) is used. :param req: The request :param opts: Options (not used) @@ -1051,12 +1052,16 @@ def _pubinfo(req, *opts): .. code-block:: yaml - pubinfo: - publisher: + [publisher: ] """ if req.t is None: raise PipeException("Your pipeline is missing a select statement.") - req.md.set_pubinfo(root(req.t), **req.args) + req.args = req.args or dict() + if not 'publisher' in req.args: + req.args['publisher'] = req.state['source'] + + req.md.add_pubpath(root(req.t), **req.args) return req.t diff --git a/src/pyff/constants.py b/src/pyff/constants.py index d4b5085f..c317caa6 100644 --- a/src/pyff/constants.py +++ b/src/pyff/constants.py @@ -19,7 +19,10 @@ ATTRS = {'collection': 'http://pyff-project.org/collection', 'entity-category': 'http://macedir.org/entity-category', 'role': 'http://pyff-project.org/role', - 'domain': 'http://pyff-project.org/domain'} + 'registration-authority': 'urn:oasis:names:tc:SAML:metadata:rpi-registration-authority', + 'publisher': 'urn:oasis:names:tc:SAML:metadata:rpi-publisher', + 'domain': 'http://pyff-project.org/domain', + 'public-suffix': 'http://pyff-project.org/public-suffix'} DIGESTS = ['sha1', 'md5', 'null'] diff --git a/src/pyff/mdrepo.py b/src/pyff/mdrepo.py index d3a9c78d..4bd76055 100644 --- a/src/pyff/mdrepo.py +++ b/src/pyff/mdrepo.py @@ -3,7 +3,10 @@ This is the implementation of the active repository of SAML metadata. The 'local' and 'remote' pipes operate on this. """ +import traceback from pyff.stats import set_metadata_info, get_metadata_info +from collections import Counter +from pyff.store import entity_attribute_dict try: from cStringIO import StringIO @@ -23,12 +26,13 @@ from lxml.etree import DocumentInvalid import xmlsec import ipaddr +from math import sqrt from . import merge_strategies from .logs import log from .utils import schema, filter_lang, root, duration2timedelta, \ hash_id, MetadataException, find_merge_strategy, entities_list, url2host, subdomains, avg_domain_distance, \ - iter_entities, validate_document, load_url, iso2datetime, xml_error + iter_entities, validate_document, load_url, iso2datetime, xml_error, hex_digest, dumptree from .constants import NS, NF_URI, EVENT_DROP_ENTITY, EVENT_IMPORT_FAIL @@ -58,9 +62,15 @@ class MDRepository(Observable): the keys are URIs and values are EntitiesDescriptor elements containing sets of metadata. """ - def __init__(self, metadata_cache_enabled=False, min_cache_ttl="PT5M", store=None): + def __init__(self, + metadata_cache_enabled=False, + min_cache_ttl="PT5M", + id_includes_source=False, + store=None): + self.metadata_cache_enabled = metadata_cache_enabled self.min_cache_ttl = min_cache_ttl + self.id_includes_source = id_includes_source if not isinstance(self.min_cache_ttl, int): try: @@ -87,6 +97,7 @@ def __init__(self, metadata_cache_enabled=False, min_cache_ttl="PT5M", store=Non def clone(self): return MDRepository(metadata_cache_enabled=self.metadata_cache_enabled, min_cache_ttl=self.min_cache_ttl, + id_includes_source=self.id_includes_source, store=self.store.clone()) def sha1_id(self, e): @@ -143,6 +154,14 @@ def ext_display(self, entity, langs=None): return display, info + def publishers(self, entity): + return [e.get('publisher') + for e in entity.iterfind(".//{%s}PublicationPath/{%s}Publication" % (NS['mdrpi'], NS['mdrpi']))] + + def registrars(self, entity): + return [e.get('registrationAuthority') + for e in entity.iterfind(".//{%s}RegistrationInfo" % NS['mdrpi'])] + def display(self, entity, langs=None): """Utility-method for computing a displayable string for a given entity. @@ -162,6 +181,117 @@ def display(self, entity, langs=None): return entity.get('entityID') + def report_publisher_weights(self): + nodes = dict() + for entity_id, entities in self.store.entity_ids().iteritems(): + for e in entities: + pub = self.publishers(e) + for i in range(0, len(pub)): + nodes.setdefault(pub[i], 0) + nodes[pub[i]] += 1 + + n_nodes = list() + for node, count in nodes.iteritems(): + n_nodes.append(dict(count=count, name=node, radius=sqrt(count+1))) + + nodes = n_nodes + + return dict(nodes=nodes) + + def report_attribute_graph(self, a, b, n=0): + values = dict() + for entity_id, entities in self.store.entity_ids().iteritems(): + for entity in entities: + for attr, vals in entity_attribute_dict(entity).iteritems(): + values.setdefault(attr, dict()) + for v in vals: + if v is not None and len(v) > 0: + values[attr].setdefault(v, set()) + values[attr][v].add(entity_id) + + links = list() + a_names = set() + b_names = set() + values.setdefault(a, []) + values.setdefault(b, []) + + for v_a in values[a]: + ids_a = values[a][v_a] + for v_b in values[b]: + ids_b = values[b][v_b] + count = len(ids_a.intersection(ids_b)) + if count > n: + links.append(dict(source=v_a, target=v_b, value=count)) + a_names.add(v_a) + b_names.add(v_b) + + a_names = list(a_names) + b_names = list(b_names) + nodes = [dict(name=n) for n in a_names] + nodes.extend([dict(name=n) for n in b_names]) + offset = len(a_names) + for link in links: + link['source'] = a_names.index(link['source']) + link['target'] = offset + b_names.index(link['target']) + + return dict(nodes=nodes, links=links) + + def report_attribute_graph2(self, a, b): + + def _pad(l, n): + ll = len(l) + if ll < n: + l.extend([0]*(n-ll)) + return l + + matrix = [] + values = dict() + for entity_id, entities in self.store.entity_ids().iteritems(): + for entity in entities: + for attr, vals in entity_attribute_dict(entity).iteritems(): + values.setdefault(attr, dict()) + for v in vals: + values[attr].setdefault(v, set()) + values[attr][v].add(entity_id) + + down = values[a].keys() + across = values[b].keys() + padlen = max(len(down), len(across)) + i = 0 + for v_a in down: + ids_a = values[a][v_a] + row = list() + for v_b in across: + ids_b = values[b][v_b] + row.append(len(ids_a.intersection(ids_b))) + matrix.append(_pad(row, padlen)) + if len(matrix) < padlen: + for i in range(0,len(matrix)-padlen): + matrix.append(_pad([], padlen)) + + return dict(matrix=matrix, down=down, across=across) + + def report_publisher_overlaps(self): + er = [] + for entity_id, entities in self.store.entity_ids().iteritems(): + ne = len(entities) - 1 # 1 isn't an overlap + publishers = set() + for e in entities: + for p in self.publishers(e): + publishers.add(p) + np = len(publishers) + er.append(dict( + _id=e.get('ID'), + entity_id=entity_id, + dup_size=ne, + publishers=list(publishers), + pub_size=np + )) + return sorted(er, reverse=True, key=lambda o: o['dup_size']) + + def report_repository_dashboard(self): + return sorted([self.summary(uri) for uri in self.store.collections()], key=lambda o: o['Size'], reverse=True) + def sub_domains(self, e): lst = [] domains = self.domains(e) @@ -178,6 +308,7 @@ def simple_summary(self, e): title, descr = self.ext_display(e) entity_id = e.get('entityID') d = dict(title=title, + _id=e.get('ID'), value=entity_id, descr=descr, icon=self.icon(e), @@ -193,7 +324,7 @@ def simple_summary(self, e): def search(self, query=None, path=None, page=None, page_limit=10, entity_filter=None, related=None): """ :param query: A string to search for. -:param path: The repository collection (@Name) to search in - None for search in all collections +:param path: The repository collection (@Name) to pidsearch in - None for search in all collections :param page: When using paged search, the page index :param page_limit: When using paged search, the maximum entry per page :param entity_filter: An optional lookup expression used to filter the entries before search is done. @@ -379,7 +510,7 @@ def set_entity_attributes(self, e, d, nf=NF_URI): def set_pubinfo(self, e, publisher=None, creation_instant=None): if e.tag != "{%s}EntitiesDescriptor" % NS['md']: - raise MetadataException("I can only set RegistrationAuthority to EntitiesDescriptor elements") + raise MetadataException("I can only set PublicationPath to EntitiesDescriptor elements") if publisher is None: raise MetadataException("At least publisher must be provided") @@ -388,7 +519,7 @@ def set_pubinfo(self, e, publisher=None, creation_instant=None): creation_instant = now.strftime("%Y-%m-%dT%H:%M:%SZ") ext = self.extensions(e) - pi = ext.find(".//{%s}PublicationInfo" % NS['mdrpi']) + pi = ext.find(".//{%s}PublicationPath" % NS['mdrpi']) if pi is not None: raise MetadataException("A PublicationInfo element is already present") pi = etree.Element("{%s}PublicationInfo" % NS['mdrpi']) @@ -397,6 +528,24 @@ def set_pubinfo(self, e, publisher=None, creation_instant=None): pi.set('creationInstant', creation_instant) ext.append(pi) + def add_pubpath(self, e, publisher=None, creation_instant=None): + if publisher is not None: + if e.tag == "{%s}EntitiesDescriptor" % NS['md']: + for ee in e.iter("{%s}EntityDescriptor" % NS['md']): + self.add_pubpath(ee, publisher=publisher, creation_instant=creation_instant) + elif e.tag == "{%s}EntityDescriptor" % NS['md']: + ext = self.extensions(e) + pp = ext.find(".//{%s}PublicationPath" % NS['mdrpi']) + if pp is None: + pp = etree.Element("{%s}PublicationPath" % NS['mdrpi']) + ext.append(pp) + + p = etree.Element("{%s}Publication" % NS['mdrpi']) + p.set('publisher', publisher) + if creation_instant: + p.set('creationInstant', creation_instant) + pp.append(p) + def set_reginfo(self, e, policy=None, authority=None): if e.tag != "{%s}EntityDescriptor" % NS['md']: raise MetadataException("I can only set RegistrationAuthority to EntityDescriptor elements") @@ -436,6 +585,22 @@ def expiration(self, t): return None + def unique_id(self, e, src): + #print "unique_id: %s -> %s %s" % (self.id_includes_source, e.get('entityID'), src) + if self.id_includes_source: + return "%s%s" % (e.get('entityID'), src) + else: + return e.get('entityID') + + def set_id(self, t, src=None): + if t.tag == '{%s}EntitiesDescriptor' % NS['md']: + if src is None: + src = t.get('Name') + for e in t.iter('{%s}EntityDescriptor' % NS['md']): + self.set_id(e, src) + elif t.tag == '{%s}EntityDescriptor' % NS['md']: + t.set('ID', "_%s" % hex_digest(self.unique_id(t, src))) + def fetch_metadata(self, resources, max_workers=5, stats=None, timeout=120, max_tries=5, validate=False): """Fetch a series of metadata URLs and optionally verify signatures. @@ -546,6 +711,7 @@ def _process_url(rurl, verifier, tid, post, enable_cache=True): if tries[link_href] < max_tries: retry_resources.append((link_href, fp, link_href, post, True)) elif relt.tag in ('{%s}EntityDescriptor' % NS['md'], '{%s}EntitiesDescriptor' % NS['md']): + self.set_id(relt, tid) n = self.store.update(t, tid) info['Size'] = str(n) else: @@ -565,10 +731,15 @@ def _process_url(rurl, verifier, tid, post, enable_cache=True): next_resources = [] for future in futures.as_completed(future_to_url): url = future_to_url[future] - if future.exception() is not None: - log.error('%r generated an exception: %s' % (url, future.exception())) - else: + try: next_resources.extend(future.result()) + except Exception, ex: + log.error('%r generated an exception: %s' % (url, future.exception())) + traceback.print_exc(ex) + #if future.exception() is not None: + # log.error('%r generated an exception: %s' % (url, future.exception())) + #else: + # next_resources.extend(future.result()) resources = next_resources if log.isDebugEnabled(): log.debug("retrying %s" % resources) @@ -622,6 +793,15 @@ def parse_metadata(self, (but after xinclude processing) """ + def _tree_name(tr): + relt = root(tr) + if relt.tag == '{%s}EntityDescriptor' % NS['md']: + return relt.get('entityID') + elif relt.tag == '{%s}EntitiesDescriptor' % NS['md']: + return relt.get('Name') + elif relt.tag == '{%s}XRDS' % NS['xrd']: + return 'xrd' + if validation_errors is None: validation_errors = dict() @@ -642,7 +822,7 @@ def parse_metadata(self, del e.attrib['ID'] if post is not None: - t = post(t) + t = post(t, source=_tree_name(t), base_url=base_url, expiration=expiration) if validate: if filter_invalid: @@ -691,6 +871,7 @@ def load_dir(self, directory, ext=".xml", url=None, validate=False, post=None, d fn = os.path.join(top, nm) try: t, valid_until = self.parse_metadata(fn, fail_on_error=True, validate=validate, post=post) + self.set_id(root(t), url) entities.extend(entities_list(t)) # local metadata is assumed to be ok except Exception, ex: log.error(ex) @@ -717,7 +898,7 @@ def _lookup(self, member): log.debug("calling store lookup %s" % member) return self.store.lookup(member) - def lookup(self, member, xp=None): + def lookup(self, member, xp=None, deduplicate=True): """ Lookup elements in the working metadata repository @@ -747,25 +928,39 @@ def lookup(self, member, xp=None): """ + def _dedup(entities): + dedup = dict() + for e in entities: + entity_id = e.get('entityID') + dedup.setdefault(entity_id, list()) + dedup[entity_id].append(e) + return [self.merge_multiple(entity_id, dups) for entity_id, dups in dedup.iteritems()] + l = self._lookup(member) if hasattr(l, 'tag'): l = [l] elif hasattr(l, '__iter__'): l = list(l) - if xp is None: - return l - else: + if xp is not None: if log.isDebugEnabled(): log.debug("filtering %d entities using xpath %s" % (len(l), xp)) t = self.entity_set(l, 'dummy') if t is None: - return [] - l = root(t).xpath(xp, namespaces=NS, smart_strings=False) + l = [] + else: + l = root(t).xpath(xp, namespaces=NS, smart_strings=False) - if log.isDebugEnabled(): - log.debug("got %d entities after filtering" % len(l)) - return l + if log.isDebugEnabled(): + log.debug("got %d entities after filtering" % len(l)) + + if deduplicate: + l = _dedup(l) + + return l + + def merge_multiple(self, entity_id, dups): + return dups[0] def entity_set(self, entities, name, cacheDuration=None, validUntil=None, validate=True): """ @@ -781,12 +976,12 @@ def entity_set(self, entities, name, cacheDuration=None, validUntil=None, valida # log.debug("entities: %s" % entities) def _a(ent): - entity_id = ent.get('entityID', None) + _id = ent.get('ID', None) # log.debug("adding %s to set" % entity_id) - if (ent is not None) and (entity_id is not None) and (entity_id not in seen): + if (ent is not None) and (_id is not None) and (_id not in seen): t.append(deepcopy(ent)) # log.debug("really adding %s to set" % entity_id) - seen[entity_id] = True + seen[_id] = True attrs = dict(Name=name, nsmap=NS) if cacheDuration is not None: @@ -833,7 +1028,7 @@ def summary(self, uri): info['Duplicates'] = [] sz = 0 - for e in self.store.lookup(uri): + for e in self.lookup(uri): entity_id = e.get('entityID') if entity_id in seen: info['Duplicates'].append(entity_id) @@ -845,9 +1040,11 @@ def summary(self, uri): info.update(get_metadata_info(uri)) if 'Validation Errors' in info and info['Validation Errors']: + info['ninvalids'] = "%d" % len(info['Validation Errors']) info['Status'] = 'danger' - + info['_id'] = hex_digest(uri) info.setdefault('Status', 'default') + return info def merge(self, t, nt, strategy=merge_strategies.replace_existing, strategy_name=None): diff --git a/src/pyff/mdx.py b/src/pyff/mdx.py index 584fe22c..7f735c2a 100644 --- a/src/pyff/mdx.py +++ b/src/pyff/mdx.py @@ -272,6 +272,65 @@ def index(self): return self.message +class Reports(object): + + def __init__(self, server=None): + self.server = server + + @cherrypy.expose + def index(self): + return render_template("reports/index.html") + + @cherrypy.expose + def top_n(self, n): + return render_template("reports/top_n.html", n=n) + + @cherrypy.expose + def top_n_api(self): + cherrypy.response.headers['Content-Type'] = 'application/json' + return dumps(self.server.md.report_repository_dashboard()) + + @cherrypy.expose + def publisher_weights(self): + return render_template("reports/publisher_weights.html") + + @cherrypy.expose + def publisher_weights_api(self): + cherrypy.response.headers['Content-Type'] = 'application/json' + return dumps(self.server.md.report_publisher_weights()) + + @cherrypy.expose + def attribute_graph(self, left, right, n): + if left not in ATTRS or right not in ATTRS: + raise NotFound() + return render_template("reports/attribute_graph.html", + attributes=ATTRS, + left=ATTRS[left], + right=ATTRS[right], + n=n) + + @cherrypy.expose + def attribute_graph_api(self, left='publisher', right='role', n=0): + if left not in ATTRS or right not in ATTRS: + raise NotFound() + cherrypy.response.headers['Content-Type'] = 'application/json' + return dumps(self.server.md.report_attribute_graph(ATTRS[left], ATTRS[right])) + + @cherrypy.expose + def publisher_overlaps(self, start=0, results_per_page=20): + report = self.server.md.report_publisher_overlaps() + return render_template("reports/publisher_overlaps.html", + start=int(start), + total=len(report), + results_per_page=int(results_per_page), + report=report) + + @cherrypy.expose + def publisher_overlaps_api(self): + cherrypy.response.headers['Content-Type'] = 'application/json' + return dumps(self.server.md.report_publisher_overlaps()) + + class MDRoot(object): """The root application of pyFF. The root application assembles the MDStats and WellKnown classes with an MDServer instance. @@ -280,8 +339,10 @@ class MDRoot(object): def __init__(self, server): self.server = server self._well_known.server = server + self.reports.server = server stats = MDStats() + reports = Reports() try: # pragma: nocover import dowser @@ -425,6 +486,7 @@ def __init__(self, aliases=None, cache_enabled=True, observers=None, + tracking=False, store=None): if aliases is None: @@ -441,7 +503,7 @@ def __init__(self, self.refresh.subscribe() self.aliases = aliases self.psl = PublicSuffixList() - self.md = MDRepository(metadata_cache_enabled=self.cache_enabled, store=store) + self.md = MDRepository(metadata_cache_enabled=self.cache_enabled, store=store, id_includes_source=tracking) if autoreload: for f in pipes: @@ -545,10 +607,10 @@ def _d(x, do_split=True): if entity_id is None: raise HTTPError(400, "400 Bad Request - missing entityID") pdict['sp'] = self.md.sha1_id(entity_id) - e = self.md.store.lookup(entity_id) + e = self.md.lookup(entity_id) if e is None or len(e) == 0: raise HTTPError(404) - + log.debug(e) if len(e) > 1: raise HTTPError(400, "400 Bad Request - multiple matches for %s" % entity_id) @@ -610,13 +672,13 @@ def _d(x, do_split=True): aliases=self.aliases, title=title) else: - entities = self.md.lookup(q) + entities = self.md.lookup(q, deduplicate=False) if not entities: raise NotFound() if len(entities) > 1: return render_template("metadata.html", md=self.md, - subheading=q, + subheading="%s" % (q, q), entities=entities) else: entity = entities[0] @@ -636,7 +698,8 @@ def _d(x, do_split=True): xml = dumptree(t, xml_declaration=False).decode('utf-8') return render_template("entity.html", headline=self.md.display(entity).strip(), - subheading=entity.get('entityID'), + subheading="%s" % + (self.md.sha1_id(entity), entity.get('entityID')), entity_id=entity.get('entityID'), content=xml) else: @@ -668,7 +731,7 @@ def main(): 'hP:p:H:CfaA:l:Rm:', ['help', 'loglevel=', 'log=', 'access-log=', 'error-log=', 'port=', 'host=', 'no-caching', 'autoreload', 'frequency=', 'modules=', - 'alias=', 'dir=', 'version', 'proxy', 'terminator']) + 'alias=', 'dir=', 'version', 'proxy', 'terminator', 'tracking']) except getopt.error, msg: print msg print __doc__ @@ -690,6 +753,7 @@ def main(): proxy = False store = MemoryStore() terminator = False + tracking = False modules = [] try: # pragma: nocover @@ -724,6 +788,8 @@ def main(): daemonize = False elif o in ('--autoreload', '-a'): autoreload = True + elif o in ('--tracking'): + tracking = True elif o in '--frequency': frequency = int(a) elif o in ('-A', '--alias'): @@ -792,6 +858,7 @@ def error_page(code, **kwargs): aliases=aliases, cache_enabled=caching, observers=observers, + tracking=tracking, store=store) pfx = ["/entities", "/metadata"] + ["/" + x for x in server.aliases.keys()] diff --git a/src/pyff/pipes.py b/src/pyff/pipes.py index db34fb27..c2a8e984 100644 --- a/src/pyff/pipes.py +++ b/src/pyff/pipes.py @@ -123,7 +123,9 @@ def __call__(self, *args, **kwargs): if t is None: raise ValueError("PipelineCallback must be called with a parse-tree argument") try: - return self.plumbing.process(self.req.md, state={self.entry_point: True}, t=t) + state = {self.entry_point: True} + state.update(**kwargs) + return self.plumbing.process(self.req.md, state=state, t=t) except Exception, ex: traceback.print_exc(ex) raise ex diff --git a/src/pyff/site/static/css/d3-tip.css b/src/pyff/site/static/css/d3-tip.css new file mode 100644 index 00000000..fc9a4ecd --- /dev/null +++ b/src/pyff/site/static/css/d3-tip.css @@ -0,0 +1,55 @@ +.d3-tip { + line-height: 1; + font-weight: bold; + padding: 12px; + background: rgba(0, 0, 0, 0.8); + color: #fff; + border-radius: 2px; + pointer-events: none; +} + +/* Creates a small triangle extender for the tooltip */ +.d3-tip:after { + box-sizing: border-box; + display: inline; + font-size: 10px; + width: 100%; + line-height: 1; + color: rgba(0, 0, 0, 0.8); + position: absolute; + pointer-events: none; +} + +/* Northward tooltips */ +.d3-tip.n:after { + content: "\25BC"; + margin: -1px 0 0 0; + top: 100%; + left: 0; + text-align: center; +} + +/* Eastward tooltips */ +.d3-tip.e:after { + content: "\25C0"; + margin: -4px 0 0 0; + top: 50%; + left: -8px; +} + +/* Southward tooltips */ +.d3-tip.s:after { + content: "\25B2"; + margin: 0 0 1px 0; + top: -8px; + left: 0; + text-align: center; +} + +/* Westward tooltips */ +.d3-tip.w:after { + content: "\25B6"; + margin: -4px 0 0 -1px; + top: 50%; + left: 100%; +} diff --git a/src/pyff/site/static/css/font-awesome/css/font-awesome.min.css b/src/pyff/site/static/css/font-awesome/css/font-awesome.min.css new file mode 100644 index 00000000..ec53d4d6 --- /dev/null +++ b/src/pyff/site/static/css/font-awesome/css/font-awesome.min.css @@ -0,0 +1,4 @@ +/*! + * Font Awesome 4.2.0 by @davegandy - http://fontawesome.io - @fontawesome + * License - http://fontawesome.io/license (Font: SIL OFL 1.1, CSS: MIT License) + */@font-face{font-family:'FontAwesome';src:url('../fonts/fontawesome-webfont.eot?v=4.2.0');src:url('../fonts/fontawesome-webfont.eot?#iefix&v=4.2.0') format('embedded-opentype'),url('../fonts/fontawesome-webfont.woff?v=4.2.0') format('woff'),url('../fonts/fontawesome-webfont.ttf?v=4.2.0') format('truetype'),url('../fonts/fontawesome-webfont.svg?v=4.2.0#fontawesomeregular') format('svg');font-weight:normal;font-style:normal}.fa{display:inline-block;font:normal normal normal 14px/1 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+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file diff --git a/src/pyff/site/static/css/font-awesome/fonts/fontawesome-webfont.ttf b/src/pyff/site/static/css/font-awesome/fonts/fontawesome-webfont.ttf new file mode 100644 index 00000000..96a3639c Binary files /dev/null and b/src/pyff/site/static/css/font-awesome/fonts/fontawesome-webfont.ttf differ diff --git a/src/pyff/site/static/css/font-awesome/fonts/fontawesome-webfont.woff b/src/pyff/site/static/css/font-awesome/fonts/fontawesome-webfont.woff new file mode 100644 index 00000000..628b6a52 Binary files /dev/null and b/src/pyff/site/static/css/font-awesome/fonts/fontawesome-webfont.woff differ diff --git a/src/pyff/site/static/css/ispinner.css b/src/pyff/site/static/css/ispinner.css new file mode 100644 index 00000000..aa5ae1b8 --- /dev/null +++ b/src/pyff/site/static/css/ispinner.css @@ -0,0 +1,35 @@ +.ispinner { + width: 100px; +} +.ispinner input { + text-align: right; +} +.input-group-btn-vertical { + position: relative; + white-space: nowrap; + width: 1%; + vertical-align: middle; + display: table-cell; +} +.input-group-btn-vertical > .btn { + display: block; + float: none; + width: 100%; + max-width: 100%; + padding: 8px; + margin-left: -1px; + position: relative; + border-radius: 0; +} +.input-group-btn-vertical > .btn:first-child { + border-top-right-radius: 4px; +} +.input-group-btn-vertical > .btn:last-child { + margin-top: -2px; + border-bottom-right-radius: 4px; +} +.input-group-btn-vertical i{ + position: absolute; + top: 0; + left: 4px; +} \ No newline at end of file diff --git a/src/pyff/site/static/css/nav.css b/src/pyff/site/static/css/nav.css index 3ca6f7aa..ba07bcb4 100644 --- a/src/pyff/site/static/css/nav.css +++ b/src/pyff/site/static/css/nav.css @@ -1,13 +1,24 @@ .nav-pills > .active > a, -.nav-pills > .active > a:hover, .nav-pills > li > a:hover { +.nav-pills > .active > a:hover, +.nav-pills > li > a:focus, +.nav-pills > li > a:hover { text-decoration: none; font-weight: bold; border-radius: 0px; - border-right: 4px solid #e97d20; color: #000 !important; background-color: transparent !important; + border-bottom: 4px solid #e97d20; } -.nav-pills > li > a{ + +.nav-stacked > .active > a, +.nav-stacked > .active > a:hover, +.nav-stacked > li > a:focus, +.nav-stacked > li > a:hover { + border-bottom: 0px; + border-right: 4px solid #e97d20; +} + +.nav-pills > li > a { border-radius: 0px; } diff --git a/src/pyff/site/static/css/spinner.css b/src/pyff/site/static/css/spinner.css index 59299df9..aca9446f 100644 --- a/src/pyff/site/static/css/spinner.css +++ b/src/pyff/site/static/css/spinner.css @@ -6,6 +6,10 @@ font-size: 10px; } +.jsspinner { + margin-top: 100px; +} + .spinner > div { background-color: #333; height: 100%; diff --git a/src/pyff/site/static/css/style.css b/src/pyff/site/static/css/style.css index 0097857a..f04fe007 100644 --- a/src/pyff/site/static/css/style.css +++ b/src/pyff/site/static/css/style.css @@ -180,4 +180,16 @@ pre.prettyprint { span.select:hover, span.proceed:hover { background-color: lightgrey !important; +} + +.inside { + font-family: "Helvetica Neue", Helvetica, Arial, sans-serif; + font-size: 18px; +} + +div.d3 > svg { + padding-top: 20px; + display: block; + margin: auto; + overflow: scroll; } \ No newline at end of file diff --git a/src/pyff/site/static/js/d3-tip.js b/src/pyff/site/static/js/d3-tip.js new file mode 100644 index 00000000..6c644009 --- /dev/null +++ b/src/pyff/site/static/js/d3-tip.js @@ -0,0 +1,304 @@ +// d3.tip +// Copyright (c) 2013 Justin Palmer +// +// Tooltips for d3.js SVG visualizations + +(function (root, factory) { + if (typeof define === 'function' && define.amd) { + // AMD. Register as an anonymous module with d3 as a dependency. + define(['d3'], factory) + } else if (typeof module === 'object' && module.exports) { + // CommonJS + module.exports = function(d3) { + d3.tip = factory(d3) + return d3.tip + } + } else { + // Browser global. + root.d3.tip = factory(root.d3) + } +}(this, function (d3) { + + // Public - contructs a new tooltip + // + // Returns a tip + return function() { + var direction = d3_tip_direction, + offset = d3_tip_offset, + html = d3_tip_html, + node = initNode(), + svg = null, + point = null, + target = null + + function tip(vis) { + svg = getSVGNode(vis) + point = svg.createSVGPoint() + document.body.appendChild(node) + } + + // Public - show the tooltip on the screen + // + // Returns a tip + tip.show = function() { + var args = Array.prototype.slice.call(arguments) + if(args[args.length - 1] instanceof SVGElement) target = args.pop() + + var content = html.apply(this, args), + poffset = offset.apply(this, args), + dir = direction.apply(this, args), + nodel = d3.select(node), + i = directions.length, + coords, + scrollTop = document.documentElement.scrollTop || document.body.scrollTop, + scrollLeft = document.documentElement.scrollLeft || document.body.scrollLeft + + nodel.html(content) + .style({ opacity: 1, 'pointer-events': 'all' }) + + while(i--) nodel.classed(directions[i], false) + coords = direction_callbacks.get(dir).apply(this) + nodel.classed(dir, true).style({ + top: (coords.top + poffset[0]) + scrollTop + 'px', + left: (coords.left + poffset[1]) + scrollLeft + 'px' + }) + + return tip + } + + // Public - hide the tooltip + // + // Returns a tip + tip.hide = function() { + var nodel = d3.select(node) + nodel.style({ opacity: 0, 'pointer-events': 'none' }) + return tip + } + + // Public: Proxy attr calls to the d3 tip container. Sets or gets attribute value. + // + // n - name of the attribute + // v - value of the attribute + // + // Returns tip or attribute value + tip.attr = function(n, v) { + if (arguments.length < 2 && typeof n === 'string') { + return d3.select(node).attr(n) + } else { + var args = Array.prototype.slice.call(arguments) + d3.selection.prototype.attr.apply(d3.select(node), args) + } + + return tip + } + + // Public: Proxy style calls to the d3 tip container. Sets or gets a style value. + // + // n - name of the property + // v - value of the property + // + // Returns tip or style property value + tip.style = function(n, v) { + if (arguments.length < 2 && typeof n === 'string') { + return d3.select(node).style(n) + } else { + var args = Array.prototype.slice.call(arguments) + d3.selection.prototype.style.apply(d3.select(node), args) + } + + return tip + } + + // Public: Set or get the direction of the tooltip + // + // v - One of n(north), s(south), e(east), or w(west), nw(northwest), + // sw(southwest), ne(northeast) or se(southeast) + // + // Returns tip or direction + tip.direction = function(v) { + if (!arguments.length) return direction + direction = v == null ? v : d3.functor(v) + + return tip + } + + // Public: Sets or gets the offset of the tip + // + // v - Array of [x, y] offset + // + // Returns offset or + tip.offset = function(v) { + if (!arguments.length) return offset + offset = v == null ? v : d3.functor(v) + + return tip + } + + // Public: sets or gets the html value of the tooltip + // + // v - String value of the tip + // + // Returns html value or tip + tip.html = function(v) { + if (!arguments.length) return html + html = v == null ? v : d3.functor(v) + + return tip + } + + function d3_tip_direction() { return 'n' } + function d3_tip_offset() { return [0, 0] } + function d3_tip_html() { return ' ' } + + var direction_callbacks = d3.map({ + n: direction_n, + s: direction_s, + e: direction_e, + w: direction_w, + nw: direction_nw, + ne: direction_ne, + sw: direction_sw, + se: direction_se + }), + + directions = direction_callbacks.keys() + + function direction_n() { + var bbox = getScreenBBox() + return { + top: bbox.n.y - node.offsetHeight, + left: bbox.n.x - node.offsetWidth / 2 + } + } + + function direction_s() { + var bbox = getScreenBBox() + return { + top: bbox.s.y, + left: bbox.s.x - node.offsetWidth / 2 + } + } + + function direction_e() { + var bbox = getScreenBBox() + return { + top: bbox.e.y - node.offsetHeight / 2, + left: bbox.e.x + } + } + + function direction_w() { + var bbox = getScreenBBox() + return { + top: bbox.w.y - node.offsetHeight / 2, + left: bbox.w.x - node.offsetWidth + } + } + + function direction_nw() { + var bbox = getScreenBBox() + return { + top: bbox.nw.y - node.offsetHeight, + left: bbox.nw.x - node.offsetWidth + } + } + + function direction_ne() { + var bbox = getScreenBBox() + return { + top: bbox.ne.y - node.offsetHeight, + left: bbox.ne.x + } + } + + function direction_sw() { + var bbox = getScreenBBox() + return { + top: bbox.sw.y, + left: bbox.sw.x - node.offsetWidth + } + } + + function direction_se() { + var bbox = getScreenBBox() + return { + top: bbox.se.y, + left: bbox.e.x + } + } + + function initNode() { + var node = d3.select(document.createElement('div')) + node.style({ + position: 'absolute', + top: 0, + opacity: 0, + 'pointer-events': 'none', + 'box-sizing': 'border-box' + }) + + return node.node() + } + + function getSVGNode(el) { + el = el.node() + if(el.tagName.toLowerCase() === 'svg') + return el + + return el.ownerSVGElement + } + + // Private - gets the screen coordinates of a shape + // + // Given a shape on the screen, will return an SVGPoint for the directions + // n(north), s(south), e(east), w(west), ne(northeast), se(southeast), nw(northwest), + // sw(southwest). + // + // +-+-+ + // | | + // + + + // | | + // +-+-+ + // + // Returns an Object {n, s, e, w, nw, sw, ne, se} + function getScreenBBox() { + var targetel = target || d3.event.target; + + while ('undefined' === typeof targetel.getScreenCTM && 'undefined' === targetel.parentNode) { + targetel = targetel.parentNode; + } + + var bbox = {}, + matrix = targetel.getScreenCTM(), + tbbox = targetel.getBBox(), + width = tbbox.width, + height = tbbox.height, + x = tbbox.x, + y = tbbox.y + + point.x = x + point.y = y + bbox.nw = point.matrixTransform(matrix) + point.x += width + bbox.ne = point.matrixTransform(matrix) + point.y += height + bbox.se = 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b/src/pyff/site/static/js/sankey.js @@ -0,0 +1,297 @@ +/** + * Created by leifj on 1/17/15. + */ +d3.sankey = function() { + var sankey = {}, + nodeWidth = 24, + nodePadding = 8, + size = [1, 1], + nodes = [], + links = []; + + sankey.nodeWidth = function(_) { + if (!arguments.length) return nodeWidth; + nodeWidth = +_; + return sankey; + }; + + sankey.nodePadding = function(_) { + if (!arguments.length) return nodePadding; + nodePadding = +_; + return sankey; + }; + + sankey.nodes = function(_) { + if (!arguments.length) return nodes; + nodes = _; + return sankey; + }; + + sankey.links = function(_) { + if (!arguments.length) return links; + links = _; + return sankey; + }; + + sankey.size = function(_) { + if (!arguments.length) return size; + size = _; + return sankey; + }; + + sankey.layout = function(iterations) { + computeNodeLinks(); + computeNodeValues(); + computeNodeBreadths(); + computeNodeDepths(iterations); + computeLinkDepths(); + return sankey; + }; + + sankey.relayout = function() { + computeLinkDepths(); + return sankey; + }; + + sankey.link = function() { + var curvature = .5; + + function link(d) { + var x0 = d.source.x + d.source.dx, + x1 = d.target.x, + xi = d3.interpolateNumber(x0, x1), + x2 = xi(curvature), + x3 = xi(1 - curvature), + y0 = d.source.y + d.sy + d.dy / 2, + y1 = d.target.y + d.ty + d.dy / 2; + return "M" + x0 + "," + y0 + + "C" + x2 + "," + y0 + + " " + x3 + "," + y1 + + " " + x1 + "," + y1; + } + + link.curvature = function(_) { + if (!arguments.length) return curvature; + curvature = +_; + return link; + }; + + return link; + }; + + // Populate the sourceLinks and targetLinks for each node. + // Also, if the source and target are not objects, assume they are indices. + function computeNodeLinks() { + nodes.forEach(function(node) { + node.sourceLinks = []; + node.targetLinks = []; + }); + links.forEach(function(link) { + var source = link.source, + target = link.target; + if (typeof source === "number") source = link.source = nodes[link.source]; + if (typeof target === "number") target = link.target = nodes[link.target]; + source.sourceLinks.push(link); + target.targetLinks.push(link); + }); + } + + // Compute the value (size) of each node by summing the associated links. + function computeNodeValues() { + nodes.forEach(function(node) { + node.value = Math.max( + d3.sum(node.sourceLinks, value), + d3.sum(node.targetLinks, value) + ); + }); + } + + // Iteratively assign the breadth (x-position) for each node. + // Nodes are assigned the maximum breadth of incoming neighbors plus one; + // nodes with no incoming links are assigned breadth zero, while + // nodes with no outgoing links are assigned the maximum breadth. + function computeNodeBreadths() { + var remainingNodes = nodes, + nextNodes, + x = 0; + + while (remainingNodes.length) { + nextNodes = []; + remainingNodes.forEach(function(node) { + node.x = x; + node.dx = nodeWidth; + node.sourceLinks.forEach(function(link) { + if (nextNodes.indexOf(link.target) < 0) { + nextNodes.push(link.target); + } + }); + }); + remainingNodes = nextNodes; + ++x; + } + + // + moveSinksRight(x); + scaleNodeBreadths((size[0] - nodeWidth) / (x - 1)); + } + + function moveSourcesRight() { + nodes.forEach(function(node) { + if (!node.targetLinks.length) { + node.x = d3.min(node.sourceLinks, function(d) { return d.target.x; }) - 1; + } + }); + } + + function moveSinksRight(x) { + nodes.forEach(function(node) { + if (!node.sourceLinks.length) { + node.x = x - 1; + } + }); + } + + function scaleNodeBreadths(kx) { + nodes.forEach(function(node) { + node.x *= kx; + }); + } + + function computeNodeDepths(iterations) { + var nodesByBreadth = d3.nest() + .key(function(d) { return d.x; }) + .sortKeys(d3.ascending) + .entries(nodes) + .map(function(d) { return d.values; }); + + // + initializeNodeDepth(); + resolveCollisions(); + for (var alpha = 1; iterations > 0; --iterations) { + relaxRightToLeft(alpha *= .99); + resolveCollisions(); + relaxLeftToRight(alpha); + resolveCollisions(); + } + + function initializeNodeDepth() { + var ky = d3.min(nodesByBreadth, function(nodes) { + return (size[1] - (nodes.length - 1) * nodePadding) / d3.sum(nodes, value); + }); + + nodesByBreadth.forEach(function(nodes) { + nodes.forEach(function(node, i) { + node.y = i; + node.dy = node.value * ky; + }); + }); + + links.forEach(function(link) { + link.dy = link.value * ky; + }); + } + + function relaxLeftToRight(alpha) { + nodesByBreadth.forEach(function(nodes, breadth) { + nodes.forEach(function(node) { + if (node.targetLinks.length) { + var y = d3.sum(node.targetLinks, weightedSource) / d3.sum(node.targetLinks, value); + node.y += (y - center(node)) * alpha; + } + }); + }); + + function weightedSource(link) { + return center(link.source) * link.value; + } + } + + function relaxRightToLeft(alpha) { + nodesByBreadth.slice().reverse().forEach(function(nodes) { + nodes.forEach(function(node) { + if (node.sourceLinks.length) { + var y = d3.sum(node.sourceLinks, weightedTarget) / d3.sum(node.sourceLinks, value); + node.y += (y - center(node)) * alpha; + } + }); + }); + + function weightedTarget(link) { + return center(link.target) * link.value; + } + } + + function resolveCollisions() { + nodesByBreadth.forEach(function(nodes) { + var node, + dy, + y0 = 0, + n = nodes.length, + i; + + // Push any overlapping nodes down. + nodes.sort(ascendingDepth); + for (i = 0; i < n; ++i) { + node = nodes[i]; + dy = y0 - node.y; + if (dy > 0) node.y += dy; + y0 = node.y + node.dy + nodePadding; + } + + // If the bottommost node goes outside the bounds, push it back up. + dy = y0 - nodePadding - size[1]; + if (dy > 0) { + y0 = node.y -= dy; + + // Push any overlapping nodes back up. + for (i = n - 2; i >= 0; --i) { + node = nodes[i]; + dy = node.y + node.dy + nodePadding - y0; + if (dy > 0) node.y -= dy; + y0 = node.y; + } + } + }); + } + + function ascendingDepth(a, b) { + return a.y - b.y; + } + } + + function computeLinkDepths() { + nodes.forEach(function(node) { + node.sourceLinks.sort(ascendingTargetDepth); + node.targetLinks.sort(ascendingSourceDepth); + }); + nodes.forEach(function(node) { + var sy = 0, ty = 0; + node.sourceLinks.forEach(function(link) { + link.sy = sy; + sy += link.dy; + }); + node.targetLinks.forEach(function(link) { + link.ty = ty; + ty += link.dy; + }); + }); + + function ascendingSourceDepth(a, b) { + return a.source.y - b.source.y; + } + + function ascendingTargetDepth(a, b) { + return a.target.y - b.target.y; + } + } + + function center(node) { + return node.y + node.dy / 2; + } + + function value(link) { + return link.value; + } + + return sankey; +}; diff --git a/src/pyff/site/static/js/spin.min.js b/src/pyff/site/static/js/spin.min.js new file mode 100644 index 00000000..ebfbb1a2 --- /dev/null +++ b/src/pyff/site/static/js/spin.min.js @@ -0,0 +1,2 @@ +//fgnass.github.com/spin.js#v2.0.1 +!function(a,b){"object"==typeof exports?module.exports=b():"function"==typeof define&&define.amd?define(b):a.Spinner=b()}(this,function(){"use strict";function a(a,b){var c,d=document.createElement(a||"div");for(c in b)d[c]=b[c];return d}function b(a){for(var b=1,c=arguments.length;c>b;b++)a.appendChild(arguments[b]);return a}function c(a,b,c,d){var e=["opacity",b,~~(100*a),c,d].join("-"),f=.01+c/d*100,g=Math.max(1-(1-a)/b*(100-f),a),h=j.substring(0,j.indexOf("Animation")).toLowerCase(),i=h&&"-"+h+"-"||"";return l[e]||(m.insertRule("@"+i+"keyframes "+e+"{0%{opacity:"+g+"}"+f+"%{opacity:"+a+"}"+(f+.01)+"%{opacity:1}"+(f+b)%100+"%{opacity:"+a+"}100%{opacity:"+g+"}}",m.cssRules.length),l[e]=1),e}function d(a,b){var c,d,e=a.style;for(b=b.charAt(0).toUpperCase()+b.slice(1),d=0;d',c)}m.addRule(".spin-vml","behavior:url(#default#VML)"),h.prototype.lines=function(a,d){function f(){return e(c("group",{coordsize:k+" "+k,coordorigin:-j+" "+-j}),{width:k,height:k})}function h(a,h,i){b(m,b(e(f(),{rotation:360/d.lines*a+"deg",left:~~h}),b(e(c("roundrect",{arcsize:d.corners}),{width:j,height:d.width,left:d.radius,top:-d.width>>1,filter:i}),c("fill",{color:g(d.color,a),opacity:d.opacity}),c("stroke",{opacity:0}))))}var i,j=d.length+d.width,k=2*j,l=2*-(d.width+d.length)+"px",m=e(f(),{position:"absolute",top:l,left:l});if(d.shadow)for(i=1;i<=d.lines;i++)h(i,-2,"progid:DXImageTransform.Microsoft.Blur(pixelradius=2,makeshadow=1,shadowopacity=.3)");for(i=1;i<=d.lines;i++)h(i);return b(a,m)},h.prototype.opacity=function(a,b,c,d){var e=a.firstChild;d=d.shadow&&d.lines||0,e&&b+d>1)+"px"})}for(var i,k=0,l=(f.lines-1)*(1-f.direction)/2;k{{ gettext('Pipeline Souurce') }} {% for uri in repo.store.collections() %} {% set info = repo.summary(uri) %}
-
{{ uri|trim|truncate(60) }}
+
+
{{ uri|trim|truncate(60) }}
+
{% if info['Description'] %}
{{ info['Description'] }}
{% endif %} - +
{% for k,v in info.iteritems() %} {% if k and v and not k in ('URL','Description','Validation Errors','Status') %} @@ -93,18 +95,17 @@ {% endif %} {% endfor %} -
{% if info['Validation Errors'] %} - + {% for ei,ee in info['Validation Errors'].iteritems() %} {% endfor %} -
Validation Errors
{{ei|trim|truncate(30)}} {{ee|trim}}
- {% endif %} + {% endif %} +
{% endfor %} diff --git a/src/pyff/templates/base.html b/src/pyff/templates/base.html index 937f1079..9f5b1555 100644 --- a/src/pyff/templates/base.html +++ b/src/pyff/templates/base.html @@ -7,6 +7,7 @@ + diff --git a/src/pyff/templates/metadata.html b/src/pyff/templates/metadata.html index 55deea2d..b7e5d872 100644 --- a/src/pyff/templates/metadata.html +++ b/src/pyff/templates/metadata.html @@ -1,22 +1,26 @@ {% extends "ui.html" %} {% block headline %}{%trans%}Search Result{%endtrans%}{% endblock %} - +{% block minitools %}{{entities|length}}{% endblock %} {% block content %}
diff --git a/src/pyff/templates/reports/attribute_graph.html b/src/pyff/templates/reports/attribute_graph.html new file mode 100644 index 00000000..8bb2e828 --- /dev/null +++ b/src/pyff/templates/reports/attribute_graph.html @@ -0,0 +1,217 @@ +
+ + +
+
+
+ From + + to + + where count > + + +
+
+
+
+
\ No newline at end of file diff --git a/src/pyff/templates/reports/attribute_graph2.html b/src/pyff/templates/reports/attribute_graph2.html new file mode 100644 index 00000000..a9490f9c --- /dev/null +++ b/src/pyff/templates/reports/attribute_graph2.html @@ -0,0 +1,136 @@ +
+ + +
+
\ No newline at end of file diff --git a/src/pyff/templates/reports/index.html b/src/pyff/templates/reports/index.html new file mode 100644 index 00000000..c1c33797 --- /dev/null +++ b/src/pyff/templates/reports/index.html @@ -0,0 +1,50 @@ +{% extends "ui.html" %} +{% block headline %}{{ gettext('Reports & Graphs') }}{% endblock %} +{% block script %} + + + + + + + +{% endblock %} +{% block content %} + + + +
+
+
+{% endblock %} \ No newline at end of file diff --git a/src/pyff/templates/reports/publisher_overlaps.html b/src/pyff/templates/reports/publisher_overlaps.html new file mode 100644 index 00000000..250fa19c --- /dev/null +++ b/src/pyff/templates/reports/publisher_overlaps.html @@ -0,0 +1,45 @@ + + +{% for e_info in report[start:start+results_per_page] %} + + + + +{% endfor %} +
{{e_info.entity_id}} +
+
+
+
    + {% for p in e_info.publishers|sort %} +
  • {{p}}
    • + {% endfor %} +
+
+
+
+ {{e_info.dup_size}} +
+
+
+
+
+ diff --git a/src/pyff/templates/reports/publisher_weights.html b/src/pyff/templates/reports/publisher_weights.html new file mode 100644 index 00000000..a921807c --- /dev/null +++ b/src/pyff/templates/reports/publisher_weights.html @@ -0,0 +1,127 @@ +
+ + +
+
\ No newline at end of file diff --git a/src/pyff/templates/reports/top_n.html b/src/pyff/templates/reports/top_n.html new file mode 100644 index 00000000..66291a7b --- /dev/null +++ b/src/pyff/templates/reports/top_n.html @@ -0,0 +1,148 @@ + + +
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/src/pyff/templates/ui.html b/src/pyff/templates/ui.html index eb37a3c2..c3e149c0 100644 --- a/src/pyff/templates/ui.html +++ b/src/pyff/templates/ui.html @@ -24,7 +24,7 @@
  • - +
    • @@ -42,6 +42,7 @@
  • {{ gettext('About') }}
  • {{ gettext('Statistics') }}
  • {{ gettext('All Entities') }}
    • +
  • {{ gettext('Reports & Graphs') }}
    •  
    diff --git a/src/pyff/test/test_md_main.py b/src/pyff/test/test_md_main.py index 2fffb9eb..0e2814d8 100644 --- a/src/pyff/test/test_md_main.py +++ b/src/pyff/test/test_md_main.py @@ -183,6 +183,11 @@ def test_run_signer(self): def test_run_bad(self): out, err, exit_code = run_pyff("--loglevel=DEBUG", self.bad) + print out + print "---" + print err + print "---" + print self.bad assert (not out) assert 'Traceback' in err assert 'No pipe named snartibartifast is installed' in err diff --git a/src/pyff/utils.py b/src/pyff/utils.py index 4625cca5..1d099d3f 100644 --- a/src/pyff/utils.py +++ b/src/pyff/utils.py @@ -377,10 +377,10 @@ def etag(s): return hex_digest('sha1', s) -def hash_id(entity, hn='sha1', prefix=True): +def hash_id(entity, hn='sha1', prefix=True, attr='entityID'): entity_id = entity if hasattr(entity, 'get'): - entity_id = entity.get('entityID') + entity_id = entity.get(attr) hstr = hex_digest(entity_id, hn) if prefix: @@ -401,8 +401,8 @@ def hex_digest(data, hn='sha1'): return m.hexdigest() -def parse_xml(io, base_url=None): - return etree.parse(io, base_url=base_url, parser=etree.XMLParser(resolve_entities=False)) +def parse_xml(ioh, base_url=None): + return etree.parse(ioh, base_url=base_url, parser=etree.XMLParser(resolve_entities=False)) class EntitySet(object): @@ -413,10 +413,10 @@ def __init__(self, initial=None): self.add(e) def add(self, value): - self._e[value.get('entityID')] = value + self._e[value.get('ID')] = value def discard(self, value): - entity_id = value.get('entityID') + entity_id = value.get('ID') if entity_id in self._e: del self._e[entity_id] @@ -428,8 +428,7 @@ def __len__(self): return len(self._e.keys()) def __contains__(self, item): - return item.get('entityID') in self._e.keys() - + return item.get('ID') in self._e.keys() class MetadataException(Exception): pass