Skip to content

Feature-IOPS-2768-ConceptMap-RisK-Reason-for-Specimen-Special-Handling #116

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
KazeemHamzat merged 2 commits into from
Aug 12, 2024
Merged

Feature-IOPS-2768-ConceptMap-RisK-Reason-for-Specimen-Special-Handling #116

Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
7877ec6
Create Genomics Risk Reason for Specimen Special Handling
KazeemHamzat Aug 9, 2024
08321bb
Update ConceptMap-Genomics-risk-reason-for-specimen-specialhandling
KazeemHamzat Aug 9, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
154 changes: 154 additions & 0 deletions ConceptMap/ConceptMap-Genomics-risk-reason-for-specimen-specialhandling.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,154 @@
{
"resourceType": "ConceptMap",
"id": "genomics-risk-reason-for-specimen-specialhandling",
"url": "https://fhir.nhs.uk/ConceptMap/risk-reason-for-specimen-specialhandling",
"version": "0.1.0",
"name": "GenomicsRiskReasonForSpecimenSpecialHandling",
"title": "Genomics Risk Reason for Specimen Special Handling",
"status": "draft",
"date": "2024-08-09T18:45:00.000Z",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.",
"purpose": "ConceptMap used for the translation and recording of the risk reason for specimen special handling . This is intended for the element Specimen.collection.extension:specimen-specialHandling.valueCoding.code",
"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.",
"targetUri": "http://snomed.info/sct",
"group": [
{
"target": "http://snomed.info/sct",
"element": [
{
"code": "anthrax",
"display": "Anthrax",
"target": [
{
"code": "409498004",
"display": "Anthrax (disorder)",
"equivalence": "equivalent"
}
]
},
{
"code": "Brucellosis",
"display": "Brucellosis",
"target": [
{
"code": "75702008",
"display": "Brucellosis (disorder)",
"equivalence": "equivalent"
}
]
},
{
"code": "ecoli0157",
"display": "E coli 0157",
"target": [
{
"code": "127531000119106",
"display": "Infection caused by Escherichia coli O157 (disorder)",
"equivalence": "equivalent"
}
]
},
{
"code": "haemolytic-uraemic-syndrome",
"display": "Haemolytic Uraemic Syndrome",
"target": [
{
"code": "111407006",
"display": "Hemolytic uremic syndrome (disorder)",
"equivalence": "equivalent"
}
]
},
{
"code": "hiv-infection",
"display": "HIV Infection",
"target": [
{
"code": "86406008",
"display": "Human immunodeficiency virus infection (disorder)",
"equivalence": "equivalent"
}
]
},
{
"code": "iv-drug-users",
"display": "IV Drug Users",
"target": [
{
"code": "228388006",
"display": "Intravenous drug user (finding)",
"equivalence": "equivalent"
}
]
},
{
"code": "jakob-creutzfeldt-disease",
"display": "Jakob-Creutzfeldt Disease",
"target": [
{
"code": "792004",
"display": "Jakob-Creutzfeldt disease (disorder)",
"equivalence": "equivalent"
}
]
},
{
"code": "melioidosis",
"display": "Melioidosis",
"target": [
{
"code": "428111003",
"display": "Melioidosis (disorder)",
"equivalence": "equivalent"
}
]
},
{
"code": "tuberculosis",
"display": "Tuberculosis",
"target": [
{
"code": "56717001",
"display": "Tuberculosis (disorder)",
"equivalence": "equivalent"
}
]
},
{
"code": "typhoid-fever",
"display": "Typhoid Fever",
"target": [
{
"code": "4834000",
"display": "Typhoid fever (disorder)",
"equivalence": "equivalent"
}
]
},
{
"code": "viral-hepatitis",
"display": "Viral Hepatitis",
"target": [
{
"code": "3738000",
"display": "Viral hepatitis (disorder)",
"equivalence": "equivalent"
}
]
}
]
}
]
}