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3 followers · 0 following
  • Los Gatos, CA

Achievements

Achievement: Pull Sharkx4Achievement: QuickdrawAchievement: YOLOAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx4Achievement: QuickdrawAchievement: YOLOAchievement: Arctic Code Vault Contributor

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sakoki/README.md

Hi there 👋

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Academically trained in Data science (NLP) / Genomics / Bioinformatics

Always interested in new and fun opportunities!

🛠️ Languages and Tools :

Python  R  Rstudio  Bash  CSS  HTML  JavaScript  MySQL  MongoDB  AWS 

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  1. fastkmers fastkmers Public

    Process fastq files and find all kmers of size N and their corresponding frequencies

    Jupyter Notebook

  2. TcrPlate TcrPlate Public

    Script for analyzing TCR plate data

    R

  3. 10Xpipeline 10Xpipeline Public

    Pipeline for processing and analyzing single cell scRNAseq data

    Jupyter Notebook

  4. kgrid-demos/crowdsort kgrid-demos/crowdsort Public

    Working beta for the CrowdSort web app.

    JavaScript 1

  5. ncbi_taxonomy ncbi_taxonomy Public

    Python script for loading and interact with the ncbi taxonomy database

    Jupyter Notebook 1

  6. n2c2_challenge_2018_alcohol_abuse_classifer n2c2_challenge_2018_alcohol_abuse_classifer Public

    The following algorithm identifies Alcohol Abuse cases from unstructured clinical documents, one of the features presented by the n2c2 challenge task 1: cohort selection 2018.

    Jupyter Notebook 1